Package bgu.bio.algorithms.graphs.hsa.matchers

Examples of bgu.bio.algorithms.graphs.hsa.matchers.OrderedBipartiteCavityMatcher.minCostMatching()

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    matcher.setMatchCost(5, 2, 3);

    boolean res = matcher.minCostCavityMatching(7, 5) == 13;
    System.out.println("Cavity matching test: " + res);

    res = matcher.minCostMatching() == 7;
    System.out.println("Full matching test: " + res);
    TIntArrayList[] matching = matcher.getCurrMatching();

    System.out.println("Current matching:");
    for (int i = 0; i < matching[0].size(); ++i) {
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    Collections.sort(exp, comp);

    isSame(ans, exp);

    Assert.assertEquals("Minimum matching answer is wrong", 7,
        matcher.minCostMatching(), 0.001);

    ans = new ArrayList<IntPair>();
    exp = new ArrayList<IntPair>();

    matching = matcher.getCurrMatching();
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