@Test
public void testIndexFasta() throws Exception {
String inFile = TestUtils.DATA_DIR + "fasta/ecoli_out.padded2.fasta";
String indPath = doStandardIndex(inFile, "fai");
FastaIndex index = new FastaIndex(indPath);
assertEquals(1, index.getSequenceNames().size());
assertNotNull(index.getIndexEntry("NC_000913_bb"));
}